Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 PTGES2-AS1-201ENST00000443493 2100 ntBASIC21.93■■□□□ 1.1
TOP1P11387 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.93■■□□□ 1.1
TOP1P11387 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.93■■□□□ 1.1
TOP1P11387 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.93■■□□□ 1.1
TOP1P11387 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
TOP1P11387 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.93■■□□□ 1.1
TOP1P11387 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.93■■□□□ 1.1
TOP1P11387 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
TOP1P11387 AIRN-201ENST00000601203 4374 ntBASIC21.93■■□□□ 1.1
TOP1P11387 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TOP1P11387 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
TOP1P11387 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP1P11387 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TOP1P11387 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP1P11387 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
TOP1P11387 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP1P11387 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP1P11387 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.92■■□□□ 1.1
TOP1P11387 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.92■■□□□ 1.1
TOP1P11387 HOMER2P1-201ENST00000455653 964 ntBASIC21.92■■□□□ 1.1
TOP1P11387 AC092647.4-201ENST00000457211 535 ntBASIC21.92■■□□□ 1.1
TOP1P11387 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC21.92■■□□□ 1.1
TOP1P11387 GCSHP2-201ENST00000560971 527 ntBASIC21.92■■□□□ 1.1
TOP1P11387 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.92■■□□□ 1.1
TOP1P11387 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
TOP1P11387 AC068587.9-201ENST00000641814 219 ntBASIC21.92■■□□□ 1.1
TOP1P11387 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
TOP1P11387 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TOP1P11387 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
TOP1P11387 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TOP1P11387 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.92■■□□□ 1.1
TOP1P11387 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
TOP1P11387 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
TOP1P11387 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP1P11387 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
TOP1P11387 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
TOP1P11387 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TOP1P11387 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
TOP1P11387 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TOP1P11387 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.91■■□□□ 1.1
TOP1P11387 AL049812.1-201ENST00000432563 2267 ntBASIC21.91■■□□□ 1.1
TOP1P11387 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC21.91■■□□□ 1.1
TOP1P11387 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
TOP1P11387 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TOP1P11387 ARMC10P1-201ENST00000313754 855 ntBASIC21.91■■□□□ 1.1
TOP1P11387 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TOP1P11387 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TOP1P11387 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TOP1P11387 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.91■■□□□ 1.1
TOP1P11387 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TOP1P11387 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.91■■□□□ 1.1
TOP1P11387 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TOP1P11387 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.91■■□□□ 1.1
TOP1P11387 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TOP1P11387 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TOP1P11387 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
TOP1P11387 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC21.91■■□□□ 1.1
TOP1P11387 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.91■■□□□ 1.1
TOP1P11387 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.9■■□□□ 1.1
TOP1P11387 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TOP1P11387 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TOP1P11387 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC21.9■■□□□ 1.1
TOP1P11387 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.9■■□□□ 1.1
TOP1P11387 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TOP1P11387 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.9■■□□□ 1.1
TOP1P11387 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.9■■□□□ 1.1
TOP1P11387 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TOP1P11387 MIR564-202ENST00000385049 94 ntBASIC21.9■■□□□ 1.1
TOP1P11387 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TOP1P11387 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.9■■□□□ 1.1
TOP1P11387 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.9■■□□□ 1.1
TOP1P11387 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.9■■□□□ 1.1
TOP1P11387 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.9■■□□□ 1.1
TOP1P11387 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.9■■□□□ 1.1
TOP1P11387 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.9■■□□□ 1.1
TOP1P11387 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.9■■□□□ 1.1
TOP1P11387 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
TOP1P11387 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
TOP1P11387 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TOP1P11387 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.9■■□□□ 1.1
TOP1P11387 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TOP1P11387 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TOP1P11387 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TOP1P11387 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TOP1P11387 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TOP1P11387 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
TOP1P11387 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TOP1P11387 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.9■■□□□ 1.1
TOP1P11387 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.9■■□□□ 1.1
TOP1P11387 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.9■■□□□ 1.1
TOP1P11387 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
TOP1P11387 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TOP1P11387 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
TOP1P11387 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
TOP1P11387 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
TOP1P11387 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.89■■□□□ 1.1
TOP1P11387 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.89■■□□□ 1.1
TOP1P11387 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.89■■□□□ 1.1
TOP1P11387 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TOP1P11387 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms