Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 FAAHP1-202ENST00000446499 1238 ntBASIC20.68■□□□□ 0.9
MMP3P08254 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP3P08254 AC024563.2-201ENST00000603282 481 ntBASIC20.68■□□□□ 0.9
MMP3P08254 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP3P08254 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP3P08254 AL357033.4-201ENST00000617703 1807 ntBASIC20.68■□□□□ 0.9
MMP3P08254 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP3P08254 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP3P08254 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
MMP3P08254 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MMP3P08254 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.68■□□□□ 0.9
MMP3P08254 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.67■□□□□ 0.9
MMP3P08254 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
MMP3P08254 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
MMP3P08254 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.67■□□□□ 0.9
MMP3P08254 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.67■□□□□ 0.9
MMP3P08254 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.67■□□□□ 0.9
MMP3P08254 FOSL1P1-201ENST00000511041 816 ntBASIC20.67■□□□□ 0.9
MMP3P08254 IGHV3-41-201ENST00000613121 348 ntBASIC20.67■□□□□ 0.9
MMP3P08254 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.67■□□□□ 0.9
MMP3P08254 KRT8P50-201ENST00000562022 1438 ntBASIC20.67■□□□□ 0.9
MMP3P08254 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MMP3P08254 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.67■□□□□ 0.9
MMP3P08254 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
MMP3P08254 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 AC093484.2-201ENST00000580996 2166 ntBASIC20.66■□□□□ 0.9
MMP3P08254 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 AFG3L1P-217ENST00000557444 2447 ntBASIC20.66■□□□□ 0.9
MMP3P08254 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
MMP3P08254 FDX1P1-201ENST00000449115 551 ntBASIC20.66■□□□□ 0.9
MMP3P08254 KRT17P6-201ENST00000453795 1220 ntBASIC20.66■□□□□ 0.9
MMP3P08254 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.66■□□□□ 0.9
MMP3P08254 AL121772.3-201ENST00000610840 674 ntBASIC20.66■□□□□ 0.9
MMP3P08254 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 MTMR9LP-203ENST00000426597 1545 ntBASIC20.66■□□□□ 0.9
MMP3P08254 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.66■□□□□ 0.9
MMP3P08254 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
MMP3P08254 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MMP3P08254 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
MMP3P08254 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
MMP3P08254 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.65■□□□□ 0.9
MMP3P08254 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
MMP3P08254 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
MMP3P08254 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.65■□□□□ 0.9
MMP3P08254 EMBP1-201ENST00000458200 901 ntBASIC20.65■□□□□ 0.9
MMP3P08254 AC104819.1-201ENST00000504587 486 ntBASIC20.65■□□□□ 0.9
MMP3P08254 AC009065.1-201ENST00000564055 1225 ntBASIC20.65■□□□□ 0.9
MMP3P08254 AC091304.2-201ENST00000564639 760 ntBASIC20.65■□□□□ 0.9
MMP3P08254 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.65■□□□□ 0.9
MMP3P08254 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.65■□□□□ 0.9
MMP3P08254 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
MMP3P08254 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MMP3P08254 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
MMP3P08254 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
MMP3P08254 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
MMP3P08254 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.64■□□□□ 0.9
MMP3P08254 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MMP3P08254 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.64■□□□□ 0.89
MMP3P08254 AC233702.3-201ENST00000578656 1387 ntBASIC20.64■□□□□ 0.89
MMP3P08254 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MMP3P08254 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
MMP3P08254 KRT18P31-201ENST00000506277 1292 ntBASIC20.64■□□□□ 0.89
MMP3P08254 AC074051.2-201ENST00000565115 352 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms