Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND3P03897 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
MT-ND3P03897 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
MT-ND3P03897 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.05■□□□□ 0.64
MT-ND3P03897 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
MT-ND3P03897 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 AL121829.2-201ENST00000620908 328 ntBASIC19.05■□□□□ 0.64
MT-ND3P03897 AC073912.3-201ENST00000624414 853 ntBASIC19.05■□□□□ 0.64
MT-ND3P03897 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.05■□□□□ 0.64
MT-ND3P03897 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.05■□□□□ 0.64
MT-ND3P03897 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.05■□□□□ 0.64
MT-ND3P03897 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.05■□□□□ 0.64
MT-ND3P03897 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.05■□□□□ 0.64
MT-ND3P03897 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.05■□□□□ 0.64
MT-ND3P03897 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
MT-ND3P03897 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
MT-ND3P03897 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.04■□□□□ 0.64
MT-ND3P03897 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
MT-ND3P03897 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 ABALON-201ENST00000629058 1903 ntBASIC19.04■□□□□ 0.64
MT-ND3P03897 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.04■□□□□ 0.64
MT-ND3P03897 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
MT-ND3P03897 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
MT-ND3P03897 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.04■□□□□ 0.64
MT-ND3P03897 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
MT-ND3P03897 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.04■□□□□ 0.64
MT-ND3P03897 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.04■□□□□ 0.64
MT-ND3P03897 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.04■□□□□ 0.64
MT-ND3P03897 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 RARRES2P10-201ENST00000564312 460 ntBASIC19.04■□□□□ 0.64
MT-ND3P03897 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
MT-ND3P03897 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.04■□□□□ 0.64
MT-ND3P03897 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.04■□□□□ 0.64
MT-ND3P03897 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
MT-ND3P03897 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
MT-ND3P03897 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.04■□□□□ 0.64
MT-ND3P03897 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
MT-ND3P03897 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
MT-ND3P03897 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
MT-ND3P03897 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 AC068880.1-201ENST00000507289 2297 ntBASIC19.03■□□□□ 0.64
MT-ND3P03897 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
MT-ND3P03897 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.03■□□□□ 0.64
MT-ND3P03897 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
MT-ND3P03897 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
MT-ND3P03897 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND3P03897 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-ND3P03897 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND3P03897 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-ND3P03897 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
MT-ND3P03897 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.02■□□□□ 0.64
MT-ND3P03897 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND3P03897 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.02■□□□□ 0.64
MT-ND3P03897 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
MT-ND3P03897 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND3P03897 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
MT-ND3P03897 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND3P03897 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
MT-ND3P03897 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.02■□□□□ 0.64
MT-ND3P03897 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms