Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 AC104581.1-202ENST00000635932 2618 ntBASIC19.57■□□□□ 0.72
TRUB2O95900 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 KRT8P45-201ENST00000414328 1447 ntBASIC19.57■□□□□ 0.72
TRUB2O95900 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.57■□□□□ 0.72
TRUB2O95900 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.57■□□□□ 0.72
TRUB2O95900 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.57■□□□□ 0.72
TRUB2O95900 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.57■□□□□ 0.72
TRUB2O95900 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRUB2O95900 AC005082.1-201ENST00000413042 2259 ntBASIC19.56■□□□□ 0.72
TRUB2O95900 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 AC009113.1-201ENST00000570267 2443 ntBASIC19.56■□□□□ 0.72
TRUB2O95900 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
TRUB2O95900 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
TRUB2O95900 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 TERF1P1-201ENST00000311003 1181 ntBASIC19.56■□□□□ 0.72
TRUB2O95900 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
TRUB2O95900 AC005521.1-201ENST00000393351 872 ntBASIC19.56■□□□□ 0.72
TRUB2O95900 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.56■□□□□ 0.72
TRUB2O95900 AL137013.1-201ENST00000432946 1228 ntBASIC19.56■□□□□ 0.72
TRUB2O95900 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.56■□□□□ 0.72
TRUB2O95900 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.56■□□□□ 0.72
TRUB2O95900 AC008556.1-201ENST00000610908 2040 ntBASIC19.56■□□□□ 0.72
TRUB2O95900 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.56■□□□□ 0.72
TRUB2O95900 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRUB2O95900 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRUB2O95900 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TRUB2O95900 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.55■□□□□ 0.72
TRUB2O95900 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TRUB2O95900 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRUB2O95900 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
TRUB2O95900 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRUB2O95900 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.55■□□□□ 0.72
TRUB2O95900 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
TRUB2O95900 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.55■□□□□ 0.72
TRUB2O95900 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 CR769767.2-201ENST00000622735 460 ntBASIC19.55■□□□□ 0.72
TRUB2O95900 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
TRUB2O95900 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
TRUB2O95900 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TRUB2O95900 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.55■□□□□ 0.72
TRUB2O95900 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.54■□□□□ 0.72
TRUB2O95900 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TRUB2O95900 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 AC073508.3-201ENST00000619697 1419 ntBASIC19.54■□□□□ 0.72
TRUB2O95900 AL357033.4-201ENST00000617703 1807 ntBASIC19.54■□□□□ 0.72
TRUB2O95900 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.54■□□□□ 0.72
TRUB2O95900 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.54■□□□□ 0.72
TRUB2O95900 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.54■□□□□ 0.72
TRUB2O95900 LIN28AP1-201ENST00000429574 405 ntBASIC19.54■□□□□ 0.72
TRUB2O95900 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.54■□□□□ 0.72
TRUB2O95900 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.54■□□□□ 0.72
TRUB2O95900 AL512604.3-201ENST00000569583 964 ntBASIC19.54■□□□□ 0.72
TRUB2O95900 MIR3180-5-201ENST00000583743 153 ntBASIC19.54■□□□□ 0.72
TRUB2O95900 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.54■□□□□ 0.72
TRUB2O95900 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.54■□□□□ 0.72
TRUB2O95900 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 AC090164.3-201ENST00000610780 2143 ntBASIC19.54■□□□□ 0.72
TRUB2O95900 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRUB2O95900 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
TRUB2O95900 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms