Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SIX6O95475 CROCCP1-201ENST00000426910 5675 ntBASIC15.66■□□□□ 0.1
SIX6O95475 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 AC138028.4-201ENST00000564984 1845 ntBASIC15.66■□□□□ 0.1
SIX6O95475 AL391005.1-201ENST00000623953 2435 ntBASIC15.66■□□□□ 0.1
SIX6O95475 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.66■□□□□ 0.1
SIX6O95475 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.66■□□□□ 0.1
SIX6O95475 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SIX6O95475 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.66■□□□□ 0.1
SIX6O95475 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 FER1L4-210ENST00000615531 5998 ntBASIC15.66■□□□□ 0.1
SIX6O95475 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 AL499627.1-201ENST00000569373 2188 ntBASIC15.66■□□□□ 0.1
SIX6O95475 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SIX6O95475 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SIX6O95475 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SIX6O95475 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.65■□□□□ 0.1
SIX6O95475 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC15.65■□□□□ 0.1
SIX6O95475 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SIX6O95475 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.65■□□□□ 0.1
SIX6O95475 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.65■□□□□ 0.1
SIX6O95475 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC15.65■□□□□ 0.1
SIX6O95475 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SIX6O95475 AL591742.1-201ENST00000604433 565 ntBASIC15.65■□□□□ 0.1
SIX6O95475 AC016405.3-201ENST00000607710 860 ntBASIC15.65■□□□□ 0.1
SIX6O95475 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SIX6O95475 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.65■□□□□ 0.1
SIX6O95475 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.65■□□□□ 0.1
SIX6O95475 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.65■□□□□ 0.1
SIX6O95475 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.65■□□□□ 0.1
SIX6O95475 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.65■□□□□ 0.1
SIX6O95475 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.65■□□□□ 0.1
SIX6O95475 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SIX6O95475 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SIX6O95475 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX6O95475 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX6O95475 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SIX6O95475 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX6O95475 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX6O95475 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
SIX6O95475 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.64■□□□□ 0.09
SIX6O95475 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC15.64■□□□□ 0.09
SIX6O95475 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.64■□□□□ 0.09
SIX6O95475 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SIX6O95475 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX6O95475 SLC25A6P5-201ENST00000435663 894 ntBASIC15.64■□□□□ 0.09
SIX6O95475 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX6O95475 TFP1-202ENST00000475455 1573 ntBASIC15.64■□□□□ 0.09
SIX6O95475 AC023632.3-201ENST00000521633 145 ntBASIC15.64■□□□□ 0.09
SIX6O95475 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC15.64■□□□□ 0.09
SIX6O95475 AC105020.6-201ENST00000621523 1217 ntBASIC15.64■□□□□ 0.09
SIX6O95475 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SIX6O95475 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SIX6O95475 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.64■□□□□ 0.09
SIX6O95475 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
SIX6O95475 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
SIX6O95475 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIX6O95475 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX6O95475 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX6O95475 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX6O95475 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.63■□□□□ 0.09
SIX6O95475 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX6O95475 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIX6O95475 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms