Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SCAF4O95104 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.3■□□□□ 0.04
SCAF4O95104 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCAF4O95104 AC091874.3-201ENST00000512672 1195 ntBASIC15.3■□□□□ 0.04
SCAF4O95104 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCAF4O95104 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCAF4O95104 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAF4O95104 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCAF4O95104 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.3■□□□□ 0.04
SCAF4O95104 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.3■□□□□ 0.04
SCAF4O95104 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCAF4O95104 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAF4O95104 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SCAF4O95104 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAF4O95104 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCAF4O95104 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAF4O95104 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SCAF4O95104 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SCAF4O95104 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.29■□□□□ 0.04
SCAF4O95104 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC15.29■□□□□ 0.04
SCAF4O95104 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
SCAF4O95104 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SCAF4O95104 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 ABALON-201ENST00000629058 1903 ntBASIC15.29■□□□□ 0.04
SCAF4O95104 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC15.29■□□□□ 0.04
SCAF4O95104 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCAF4O95104 AC104417.2-201ENST00000562989 1793 ntBASIC15.29■□□□□ 0.04
SCAF4O95104 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SCAF4O95104 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.28■□□□□ 0.04
SCAF4O95104 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SCAF4O95104 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.28■□□□□ 0.04
SCAF4O95104 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.28■□□□□ 0.04
SCAF4O95104 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SCAF4O95104 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.28■□□□□ 0.04
SCAF4O95104 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SCAF4O95104 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SCAF4O95104 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.28■□□□□ 0.04
SCAF4O95104 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.28■□□□□ 0.04
SCAF4O95104 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
SCAF4O95104 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.28■□□□□ 0.04
SCAF4O95104 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.28■□□□□ 0.04
SCAF4O95104 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.28■□□□□ 0.04
SCAF4O95104 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.28■□□□□ 0.04
SCAF4O95104 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.28■□□□□ 0.04
SCAF4O95104 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 ANO7L1-203ENST00000602586 1720 ntBASIC15.28■□□□□ 0.04
SCAF4O95104 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SCAF4O95104 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SCAF4O95104 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SCAF4O95104 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SCAF4O95104 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 CD276-203ENST00000537340 2439 ntTSL 2 BASIC15.27■□□□□ 0.04
SCAF4O95104 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.27■□□□□ 0.04
SCAF4O95104 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
SCAF4O95104 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
SCAF4O95104 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SCAF4O95104 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SCAF4O95104 AC073592.3-201ENST00000625118 1834 ntBASIC15.27■□□□□ 0.04
SCAF4O95104 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SCAF4O95104 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms