Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AL109923.1-201ENST00000618799 583 ntBASIC18.9■□□□□ 0.62
CDH16O75309 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH16O75309 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH16O75309 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.9■□□□□ 0.62
CDH16O75309 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDH16O75309 AC138028.4-201ENST00000564984 1845 ntBASIC18.9■□□□□ 0.62
CDH16O75309 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.9■□□□□ 0.62
CDH16O75309 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH16O75309 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CDH16O75309 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDH16O75309 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDH16O75309 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDH16O75309 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH16O75309 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH16O75309 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDH16O75309 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH16O75309 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CDH16O75309 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDH16O75309 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH16O75309 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH16O75309 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
CDH16O75309 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
CDH16O75309 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH16O75309 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.89■□□□□ 0.61
CDH16O75309 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.89■□□□□ 0.61
CDH16O75309 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.89■□□□□ 0.61
CDH16O75309 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.89■□□□□ 0.61
CDH16O75309 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH16O75309 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH16O75309 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.89■□□□□ 0.61
CDH16O75309 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH16O75309 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDH16O75309 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.89■□□□□ 0.61
CDH16O75309 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 AC112777.1-201ENST00000540175 1423 ntBASIC18.89■□□□□ 0.61
CDH16O75309 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDH16O75309 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDH16O75309 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
CDH16O75309 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.88■□□□□ 0.61
CDH16O75309 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH16O75309 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH16O75309 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH16O75309 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CDH16O75309 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CDH16O75309 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.88■□□□□ 0.61
CDH16O75309 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH16O75309 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH16O75309 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CDH16O75309 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH16O75309 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH16O75309 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 HLA-A-209ENST00000638375 975 ntBASIC18.88■□□□□ 0.61
CDH16O75309 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CDH16O75309 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CDH16O75309 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH16O75309 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH16O75309 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDH16O75309 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH16O75309 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH16O75309 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
CDH16O75309 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH16O75309 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH16O75309 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH16O75309 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH16O75309 TSPY6P-201ENST00000448518 926 ntBASIC18.87■□□□□ 0.61
CDH16O75309 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH16O75309 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH16O75309 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CDH16O75309 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH16O75309 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH16O75309 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CDH16O75309 PNMA6B-201ENST00000538162 1200 ntBASIC18.87■□□□□ 0.61
CDH16O75309 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.87■□□□□ 0.61
CDH16O75309 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.87■□□□□ 0.61
CDH16O75309 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH16O75309 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CDH16O75309 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms