Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.2■□□□□ 0.98
CCNT1O60563 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CCNT1O60563 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCNT1O60563 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCNT1O60563 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCNT1O60563 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
CCNT1O60563 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CCNT1O60563 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCNT1O60563 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.19■□□□□ 0.98
CCNT1O60563 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 TERF1P1-201ENST00000311003 1181 ntBASIC21.19■□□□□ 0.98
CCNT1O60563 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 AC005521.1-201ENST00000393351 872 ntBASIC21.19■□□□□ 0.98
CCNT1O60563 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNT1O60563 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21.19■□□□□ 0.98
CCNT1O60563 ATP5G1P1-201ENST00000448724 379 ntBASIC21.19■□□□□ 0.98
CCNT1O60563 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CCNT1O60563 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.19■□□□□ 0.98
CCNT1O60563 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
CCNT1O60563 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.19■□□□□ 0.98
CCNT1O60563 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC21.19■□□□□ 0.98
CCNT1O60563 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCNT1O60563 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.18■□□□□ 0.98
CCNT1O60563 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CCNT1O60563 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNT1O60563 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.18■□□□□ 0.98
CCNT1O60563 AC009947.2-201ENST00000444014 672 ntBASIC21.18■□□□□ 0.98
CCNT1O60563 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.18■□□□□ 0.98
CCNT1O60563 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.18■□□□□ 0.98
CCNT1O60563 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCNT1O60563 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.18■□□□□ 0.98
CCNT1O60563 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCNT1O60563 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CCNT1O60563 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCNT1O60563 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 AC034236.2-201ENST00000606662 1610 ntBASIC21.18■□□□□ 0.98
CCNT1O60563 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.18■□□□□ 0.98
CCNT1O60563 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCNT1O60563 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNT1O60563 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNT1O60563 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNT1O60563 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNT1O60563 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNT1O60563 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.17■□□□□ 0.98
CCNT1O60563 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC21.17■□□□□ 0.98
CCNT1O60563 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.17■□□□□ 0.98
CCNT1O60563 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNT1O60563 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNT1O60563 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.17■□□□□ 0.98
CCNT1O60563 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.17■□□□□ 0.98
CCNT1O60563 AL138966.2-201ENST00000621997 464 ntBASIC21.17■□□□□ 0.98
CCNT1O60563 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNT1O60563 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCNT1O60563 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
CCNT1O60563 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNT1O60563 AL020996.1-203ENST00000536896 2307 ntBASIC21.17■□□□□ 0.98
CCNT1O60563 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNT1O60563 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.17■□□□□ 0.98
CCNT1O60563 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCNT1O60563 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CCNT1O60563 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CCNT1O60563 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CCNT1O60563 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.16■□□□□ 0.98
CCNT1O60563 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
CCNT1O60563 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CCNT1O60563 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms