Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.25■□□□□ 0.03
SSSCA1O60232 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SSSCA1O60232 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.25■□□□□ 0.03
SSSCA1O60232 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.25■□□□□ 0.03
SSSCA1O60232 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SSSCA1O60232 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC15.25■□□□□ 0.03
SSSCA1O60232 AC007322.1-201ENST00000426983 750 ntBASIC15.25■□□□□ 0.03
SSSCA1O60232 AC034268.1-201ENST00000441047 882 ntBASIC15.25■□□□□ 0.03
SSSCA1O60232 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.25■□□□□ 0.03
SSSCA1O60232 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC15.25■□□□□ 0.03
SSSCA1O60232 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.25■□□□□ 0.03
SSSCA1O60232 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.25■□□□□ 0.03
SSSCA1O60232 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 AC231657.2-201ENST00000624556 255 ntBASIC15.25■□□□□ 0.03
SSSCA1O60232 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
SSSCA1O60232 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC15.25■□□□□ 0.03
SSSCA1O60232 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.25■□□□□ 0.03
SSSCA1O60232 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.25■□□□□ 0.03
SSSCA1O60232 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SSSCA1O60232 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
SSSCA1O60232 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 AC135776.1-201ENST00000319817 2481 ntBASIC15.24■□□□□ 0.03
SSSCA1O60232 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.24■□□□□ 0.03
SSSCA1O60232 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
SSSCA1O60232 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.24■□□□□ 0.03
SSSCA1O60232 PRORSD1P-202ENST00000563365 2154 ntBASIC15.24■□□□□ 0.03
SSSCA1O60232 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
SSSCA1O60232 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
SSSCA1O60232 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 MIR638-201ENST00000385237 100 ntBASIC15.24■□□□□ 0.03
SSSCA1O60232 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.24■□□□□ 0.03
SSSCA1O60232 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.24■□□□□ 0.03
SSSCA1O60232 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.24■□□□□ 0.03
SSSCA1O60232 RPS2P52-201ENST00000469610 820 ntBASIC15.24■□□□□ 0.03
SSSCA1O60232 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.24■□□□□ 0.03
SSSCA1O60232 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.24■□□□□ 0.03
SSSCA1O60232 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.24■□□□□ 0.03
SSSCA1O60232 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.24■□□□□ 0.03
SSSCA1O60232 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.24■□□□□ 0.03
SSSCA1O60232 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.24■□□□□ 0.03
SSSCA1O60232 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
SSSCA1O60232 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
SSSCA1O60232 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 AL499627.1-201ENST00000569373 2188 ntBASIC15.24■□□□□ 0.03
SSSCA1O60232 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SSSCA1O60232 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.24■□□□□ 0.03
SSSCA1O60232 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
SSSCA1O60232 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.23■□□□□ 0.03
SSSCA1O60232 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
SSSCA1O60232 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SSSCA1O60232 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SSSCA1O60232 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.23■□□□□ 0.03
SSSCA1O60232 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SSSCA1O60232 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms