Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TO15178 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TO15178 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TO15178 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.2■□□□□ 0.34
TO15178 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.2■□□□□ 0.34
TO15178 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TO15178 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TO15178 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TO15178 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TO15178 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TO15178 MYC-208ENST00000641036 567 ntBASIC17.2■□□□□ 0.34
TO15178 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.2■□□□□ 0.34
TO15178 ANO7L1-203ENST00000602586 1720 ntBASIC17.2■□□□□ 0.34
TO15178 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TO15178 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TO15178 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TO15178 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
TO15178 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TO15178 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TO15178 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.2■□□□□ 0.34
TO15178 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TO15178 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.2■□□□□ 0.34
TO15178 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TO15178 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TO15178 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
TO15178 AP000593.1-201ENST00000393668 712 ntBASIC17.19■□□□□ 0.34
TO15178 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.19■□□□□ 0.34
TO15178 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TO15178 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.19■□□□□ 0.34
TO15178 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 AC009947.2-201ENST00000444014 672 ntBASIC17.19■□□□□ 0.34
TO15178 ATP5G1P1-201ENST00000448724 379 ntBASIC17.19■□□□□ 0.34
TO15178 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TO15178 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.19■□□□□ 0.34
TO15178 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.19■□□□□ 0.34
TO15178 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.19■□□□□ 0.34
TO15178 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.19■□□□□ 0.34
TO15178 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TO15178 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.19■□□□□ 0.34
TO15178 AC112777.1-201ENST00000540175 1423 ntBASIC17.19■□□□□ 0.34
TO15178 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.19■□□□□ 0.34
TO15178 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.19■□□□□ 0.34
TO15178 LETM1P2-201ENST00000597330 2178 ntBASIC17.19■□□□□ 0.34
TO15178 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.19■□□□□ 0.34
TO15178 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
TO15178 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.19■□□□□ 0.34
TO15178 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TO15178 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.18■□□□□ 0.34
TO15178 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.18■□□□□ 0.34
TO15178 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TO15178 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.18■□□□□ 0.34
TO15178 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
TO15178 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TO15178 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.18■□□□□ 0.34
TO15178 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TO15178 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.18■□□□□ 0.34
TO15178 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TO15178 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TO15178 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.18■□□□□ 0.34
TO15178 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TO15178 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TO15178 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.17■□□□□ 0.34
TO15178 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.17■□□□□ 0.34
TO15178 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TO15178 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TO15178 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TO15178 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TO15178 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TO15178 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
TO15178 BX664615.1-201ENST00000443558 458 ntBASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms