Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
COPEO14579 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COPEO14579 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.71■□□□□ 0.59
COPEO14579 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
COPEO14579 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.71■□□□□ 0.59
COPEO14579 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COPEO14579 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COPEO14579 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
COPEO14579 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.71■□□□□ 0.59
COPEO14579 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
COPEO14579 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.7■□□□□ 0.58
COPEO14579 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
COPEO14579 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
COPEO14579 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.7■□□□□ 0.58
COPEO14579 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 C1QL1P1-201ENST00000568105 661 ntBASIC18.7■□□□□ 0.58
COPEO14579 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.7■□□□□ 0.58
COPEO14579 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
COPEO14579 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
COPEO14579 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
COPEO14579 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
COPEO14579 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.7■□□□□ 0.58
COPEO14579 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
COPEO14579 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.7■□□□□ 0.58
COPEO14579 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.69■□□□□ 0.58
COPEO14579 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COPEO14579 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.69■□□□□ 0.58
COPEO14579 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.69■□□□□ 0.58
COPEO14579 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
COPEO14579 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
COPEO14579 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.69■□□□□ 0.58
COPEO14579 TSPY6P-201ENST00000448518 926 ntBASIC18.69■□□□□ 0.58
COPEO14579 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.69■□□□□ 0.58
COPEO14579 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.69■□□□□ 0.58
COPEO14579 PRKY-204ENST00000533551 1019 ntBASIC18.69■□□□□ 0.58
COPEO14579 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.69■□□□□ 0.58
COPEO14579 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
COPEO14579 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.69■□□□□ 0.58
COPEO14579 MYC-208ENST00000641036 567 ntBASIC18.69■□□□□ 0.58
COPEO14579 AC068587.9-201ENST00000641814 219 ntBASIC18.69■□□□□ 0.58
COPEO14579 AC135776.1-201ENST00000319817 2481 ntBASIC18.69■□□□□ 0.58
COPEO14579 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.69■□□□□ 0.58
COPEO14579 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
COPEO14579 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.69■□□□□ 0.58
COPEO14579 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 KRT8P41-201ENST00000533985 1514 ntBASIC18.69■□□□□ 0.58
COPEO14579 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
COPEO14579 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COPEO14579 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 PKD1P1-201ENST00000458669 6805 ntBASIC18.68■□□□□ 0.58
COPEO14579 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
COPEO14579 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
COPEO14579 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.68■□□□□ 0.58
COPEO14579 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.68■□□□□ 0.58
COPEO14579 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
COPEO14579 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.68■□□□□ 0.58
COPEO14579 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.68■□□□□ 0.58
COPEO14579 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COPEO14579 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COPEO14579 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms