Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
NDUFA4O00483 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFA4O00483 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFA4O00483 EGLN1P1-201ENST00000531623 762 ntBASIC14.34□□□□□ -0.11
NDUFA4O00483 NAPSB-206ENST00000562112 1266 ntBASIC14.34□□□□□ -0.11
NDUFA4O00483 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFA4O00483 AC010653.2-201ENST00000623505 997 ntBASIC14.34□□□□□ -0.11
NDUFA4O00483 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
NDUFA4O00483 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
NDUFA4O00483 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.34□□□□□ -0.11
NDUFA4O00483 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.34□□□□□ -0.11
NDUFA4O00483 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NDUFA4O00483 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC14.33□□□□□ -0.11
NDUFA4O00483 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFA4O00483 AC092338.2-201ENST00000568827 1415 ntBASIC14.33□□□□□ -0.11
NDUFA4O00483 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFA4O00483 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NDUFA4O00483 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC14.33□□□□□ -0.11
NDUFA4O00483 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NDUFA4O00483 MIR564-202ENST00000385049 94 ntBASIC14.33□□□□□ -0.12
NDUFA4O00483 PHB2-202ENST00000440277 996 ntTSL 5 BASIC14.33□□□□□ -0.12
NDUFA4O00483 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFA4O00483 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFA4O00483 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.33□□□□□ -0.12
NDUFA4O00483 AP003041.3-201ENST00000527151 707 ntBASIC14.33□□□□□ -0.12
NDUFA4O00483 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.33□□□□□ -0.12
NDUFA4O00483 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.33□□□□□ -0.12
NDUFA4O00483 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.33□□□□□ -0.12
NDUFA4O00483 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFA4O00483 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFA4O00483 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.33□□□□□ -0.12
NDUFA4O00483 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NDUFA4O00483 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFA4O00483 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFA4O00483 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.32□□□□□ -0.12
NDUFA4O00483 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFA4O00483 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14.32□□□□□ -0.12
NDUFA4O00483 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
NDUFA4O00483 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFA4O00483 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.32□□□□□ -0.12
NDUFA4O00483 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFA4O00483 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NDUFA4O00483 AP000593.1-201ENST00000393668 712 ntBASIC14.32□□□□□ -0.12
NDUFA4O00483 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
NDUFA4O00483 AL596275.1-201ENST00000423464 877 ntBASIC14.32□□□□□ -0.12
NDUFA4O00483 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.32□□□□□ -0.12
NDUFA4O00483 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.32□□□□□ -0.12
NDUFA4O00483 GXYLT1P6-201ENST00000456472 1187 ntBASIC14.32□□□□□ -0.12
NDUFA4O00483 KRT18P41-201ENST00000518924 1277 ntBASIC14.32□□□□□ -0.12
NDUFA4O00483 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.32□□□□□ -0.12
NDUFA4O00483 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFA4O00483 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.32□□□□□ -0.12
NDUFA4O00483 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC14.32□□□□□ -0.12
NDUFA4O00483 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC14.32□□□□□ -0.12
NDUFA4O00483 AC034236.2-201ENST00000606662 1610 ntBASIC14.32□□□□□ -0.12
NDUFA4O00483 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NDUFA4O00483 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NDUFA4O00483 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
NDUFA4O00483 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NDUFA4O00483 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms