Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.79■□□□□ 0.44
PDLIM1O00151 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDLIM1O00151 AC126763.1-201ENST00000552015 2118 ntBASIC17.78■□□□□ 0.44
PDLIM1O00151 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM1O00151 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.78■□□□□ 0.44
PDLIM1O00151 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM1O00151 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.78■□□□□ 0.44
PDLIM1O00151 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM1O00151 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.78■□□□□ 0.44
PDLIM1O00151 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.78■□□□□ 0.44
PDLIM1O00151 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PDLIM1O00151 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.78■□□□□ 0.44
PDLIM1O00151 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDLIM1O00151 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PDLIM1O00151 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.78■□□□□ 0.44
PDLIM1O00151 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDLIM1O00151 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.77■□□□□ 0.44
PDLIM1O00151 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PDLIM1O00151 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.77■□□□□ 0.44
PDLIM1O00151 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PDLIM1O00151 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PDLIM1O00151 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PDLIM1O00151 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PDLIM1O00151 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.77■□□□□ 0.44
PDLIM1O00151 RNA5SP413-201ENST00000516373 109 ntBASIC17.77■□□□□ 0.44
PDLIM1O00151 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.77■□□□□ 0.44
PDLIM1O00151 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.77■□□□□ 0.44
PDLIM1O00151 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.77■□□□□ 0.44
PDLIM1O00151 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PDLIM1O00151 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PDLIM1O00151 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PDLIM1O00151 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM1O00151 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM1O00151 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM1O00151 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.77■□□□□ 0.43
PDLIM1O00151 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PDLIM1O00151 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM1O00151 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PDLIM1O00151 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.77■□□□□ 0.43
PDLIM1O00151 HCG11-201ENST00000411553 5696 ntBASIC17.76■□□□□ 0.43
PDLIM1O00151 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.76■□□□□ 0.43
PDLIM1O00151 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM1O00151 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 ESPNP-201ENST00000270691 2015 ntBASIC17.76■□□□□ 0.43
PDLIM1O00151 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 TFP1-202ENST00000475455 1573 ntBASIC17.76■□□□□ 0.43
PDLIM1O00151 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM1O00151 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PDLIM1O00151 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.76■□□□□ 0.43
PDLIM1O00151 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.76■□□□□ 0.43
PDLIM1O00151 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.76■□□□□ 0.43
PDLIM1O00151 UNC93B5-201ENST00000530315 699 ntBASIC17.76■□□□□ 0.43
PDLIM1O00151 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PDLIM1O00151 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PDLIM1O00151 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms