Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.02■□□□□ 0.96
DDX39AO00148 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
DDX39AO00148 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
DDX39AO00148 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 AL671277.2-201ENST00000458060 996 ntBASIC21.02■□□□□ 0.96
DDX39AO00148 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.02■□□□□ 0.96
DDX39AO00148 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.02■□□□□ 0.96
DDX39AO00148 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.02■□□□□ 0.96
DDX39AO00148 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC21.02■□□□□ 0.96
DDX39AO00148 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
DDX39AO00148 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
DDX39AO00148 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.02■□□□□ 0.96
DDX39AO00148 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
DDX39AO00148 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
DDX39AO00148 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDX39AO00148 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.02■□□□□ 0.95
DDX39AO00148 HEIH-201ENST00000623091 1652 ntBASIC21.02■□□□□ 0.95
DDX39AO00148 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
DDX39AO00148 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
DDX39AO00148 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
DDX39AO00148 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX39AO00148 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX39AO00148 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
DDX39AO00148 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 MIR564-202ENST00000385049 94 ntBASIC21.01■□□□□ 0.95
DDX39AO00148 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 SEC1P-202ENST00000473944 940 ntBASIC21.01■□□□□ 0.95
DDX39AO00148 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.01■□□□□ 0.95
DDX39AO00148 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
DDX39AO00148 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX39AO00148 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.01■□□□□ 0.95
DDX39AO00148 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
DDX39AO00148 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX39AO00148 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX39AO00148 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX39AO00148 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX39AO00148 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX39AO00148 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX39AO00148 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21■□□□□ 0.95
DDX39AO00148 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
DDX39AO00148 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX39AO00148 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
DDX39AO00148 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21■□□□□ 0.95
DDX39AO00148 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
DDX39AO00148 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
DDX39AO00148 STARP1-201ENST00000397973 869 ntBASIC21■□□□□ 0.95
DDX39AO00148 GRAMD4P1-201ENST00000435181 1110 ntBASIC21■□□□□ 0.95
DDX39AO00148 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21■□□□□ 0.95
DDX39AO00148 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21■□□□□ 0.95
DDX39AO00148 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21■□□□□ 0.95
DDX39AO00148 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC21■□□□□ 0.95
DDX39AO00148 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
DDX39AO00148 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX39AO00148 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21■□□□□ 0.95
DDX39AO00148 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
DDX39AO00148 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX39AO00148 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.99■□□□□ 0.95
DDX39AO00148 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.99■□□□□ 0.95
DDX39AO00148 AL357033.4-201ENST00000617703 1807 ntBASIC20.99■□□□□ 0.95
DDX39AO00148 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX39AO00148 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.99■□□□□ 0.95
DDX39AO00148 MTMR9LP-203ENST00000426597 1545 ntBASIC20.99■□□□□ 0.95
DDX39AO00148 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX39AO00148 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX39AO00148 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX39AO00148 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX39AO00148 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX39AO00148 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX39AO00148 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX39AO00148 RASA4DP-201ENST00000460726 1199 ntBASIC20.99■□□□□ 0.95
DDX39AO00148 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.99■□□□□ 0.95
DDX39AO00148 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX39AO00148 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.99■□□□□ 0.95
DDX39AO00148 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms