Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 AL139384.1-201ENST00000612143 3047 ntBASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 MPST-204ENST00000404393 1329 ntTSL 5 BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 DUX4L2-201ENST00000561772 1275 ntBASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 CCDC92B-201ENST00000575506 885 ntBASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 DUX4L6-201ENST00000626483 1275 ntBASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 DUX4L1-201ENST00000627662 1275 ntBASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 DUX4L8-201ENST00000629013 1275 ntBASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 DUX4L3-201ENST00000630187 1275 ntBASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 DUX4L7-201ENST00000630678 1275 ntBASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 DUX4L5-201ENST00000630834 1275 ntBASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 RBM17P2-201ENST00000616397 1405 ntBASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC11.84□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.51
TMEM256-PLSCR3K7ERE1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC11.83□□□□□ -0.52
TMEM256-PLSCR3K7ERE1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
TMEM256-PLSCR3K7ERE1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM256-PLSCR3K7ERE1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
TMEM256-PLSCR3K7ERE1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM256-PLSCR3K7ERE1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
TMEM256-PLSCR3K7ERE1 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM256-PLSCR3K7ERE1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
TMEM256-PLSCR3K7ERE1 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
TMEM256-PLSCR3K7ERE1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms