Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RCCD1A6NED2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
RCCD1A6NED2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RCCD1A6NED2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.89■□□□□ 0.77
RCCD1A6NED2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.89■□□□□ 0.77
RCCD1A6NED2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 AC004980.1-204ENST00000429707 299 ntBASIC19.89■□□□□ 0.77
RCCD1A6NED2 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.89■□□□□ 0.77
RCCD1A6NED2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 AP003097.1-201ENST00000530657 1135 ntBASIC19.89■□□□□ 0.77
RCCD1A6NED2 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.89■□□□□ 0.77
RCCD1A6NED2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.89■□□□□ 0.77
RCCD1A6NED2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RCCD1A6NED2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RCCD1A6NED2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.89■□□□□ 0.77
RCCD1A6NED2 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RCCD1A6NED2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RCCD1A6NED2 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
RCCD1A6NED2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RCCD1A6NED2 REXO1L9P-201ENST00000604264 2108 ntBASIC19.88■□□□□ 0.77
RCCD1A6NED2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCCD1A6NED2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.88■□□□□ 0.77
RCCD1A6NED2 AC020916.1-201ENST00000587762 1774 ntBASIC19.88■□□□□ 0.77
RCCD1A6NED2 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCCD1A6NED2 AC112777.1-201ENST00000540175 1423 ntBASIC19.88■□□□□ 0.77
RCCD1A6NED2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCCD1A6NED2 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCCD1A6NED2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RCCD1A6NED2 KRASP1-201ENST00000407852 552 ntBASIC19.88■□□□□ 0.77
RCCD1A6NED2 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RCCD1A6NED2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCCD1A6NED2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCCD1A6NED2 AL445675.2-201ENST00000620291 557 ntBASIC19.88■□□□□ 0.77
RCCD1A6NED2 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCCD1A6NED2 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.88■□□□□ 0.77
RCCD1A6NED2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RCCD1A6NED2 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.88■□□□□ 0.77
RCCD1A6NED2 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 KRT16P5-201ENST00000455284 522 ntBASIC19.87■□□□□ 0.77
RCCD1A6NED2 AC091390.4-202ENST00000476426 537 ntBASIC19.87■□□□□ 0.77
RCCD1A6NED2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 AC138028.4-201ENST00000564984 1845 ntBASIC19.87■□□□□ 0.77
RCCD1A6NED2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RCCD1A6NED2 AC139713.2-201ENST00000641328 2723 ntBASIC19.87■□□□□ 0.77
RCCD1A6NED2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RCCD1A6NED2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCCD1A6NED2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCCD1A6NED2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.86■□□□□ 0.77
RCCD1A6NED2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RCCD1A6NED2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RCCD1A6NED2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.86■□□□□ 0.77
RCCD1A6NED2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.86■□□□□ 0.77
RCCD1A6NED2 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RCCD1A6NED2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCCD1A6NED2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCCD1A6NED2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCCD1A6NED2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RCCD1A6NED2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RCCD1A6NED2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RCCD1A6NED2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RCCD1A6NED2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.86■□□□□ 0.77
RCCD1A6NED2 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms