Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
TRAV8-3A0A0A6YYJ7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MIR4651-201ENST00000582622 73 ntBASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AC004264.1-201ENST00000608354 794 ntBASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AC141586.3-201ENST00000562166 1838 ntBASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AL354751.1-201ENST00000412768 1863 ntBASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AC239809.2-201ENST00000415381 517 ntBASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AC128676.1-201ENST00000454392 318 ntBASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AC068880.1-201ENST00000507289 2297 ntBASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 BICD1-207ENST00000551848 1962 ntBASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AL031598.1-201ENST00000561511 1773 ntBASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AC073648.6-201ENST00000641589 218 ntBASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 NOC2LP1-202ENST00000452600 2235 ntBASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 FP475955.4-201ENST00000623131 1990 ntBASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TFP1-202ENST00000475455 1573 ntBASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC13.25□□□□□ -0.29
TRAV8-3A0A0A6YYJ7 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms