Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 FAM207BP-201ENST00000447172 505 ntBASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 NUDT16P1-203ENST00000513809 620 ntBASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC14.11□□□□□ -0.15
HLA-DRB4X5D2U9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 REXO2-216ENST00000544196 452 ntTSL 3 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 DGCR10-201ENST00000609839 495 ntBASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 AC130371.2-201ENST00000619443 611 ntBASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HLA-DRB4X5D2U9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 AC011506.1-201ENST00000474329 610 ntBASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 AC116562.2-201ENST00000507042 360 ntBASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 PENK-204ENST00000518770 863 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 Z99916.2-201ENST00000604037 246 ntBASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HLA-DRB4X5D2U9 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms