Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CLCA3PQ9Y6N3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCA3PQ9Y6N3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCA3PQ9Y6N3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCA3PQ9Y6N3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCA3PQ9Y6N3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCA3PQ9Y6N3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CLCA3PQ9Y6N3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.7■□□□□ 0.42
CLCA3PQ9Y6N3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 AL353719.1-201ENST00000566847 864 ntBASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 AL023803.3-201ENST00000615559 522 ntBASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CLCA3PQ9Y6N3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 ECEL1P2-202ENST00000465689 757 ntBASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 AC012306.2-201ENST00000609350 630 ntBASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 AC007613.1-201ENST00000572811 2597 ntBASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCA3PQ9Y6N3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 AC092338.2-201ENST00000568827 1415 ntBASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 AC007663.1-201ENST00000438948 1240 ntBASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 AC005363.2-201ENST00000618631 242 ntBASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 AC010653.2-201ENST00000623505 997 ntBASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLCA3PQ9Y6N3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCA3PQ9Y6N3 KRT8P3-201ENST00000519669 1449 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms