Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 BX276092.5-203ENST00000456199 560 ntBASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 HOXB1-202ENST00000577092 1414 ntBASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.29■□□□□ 0.52
CSNK1G3Q9Y6M4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 TSSC2-201ENST00000450217 709 ntBASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 AL157888.1-201ENST00000631930 593 ntBASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 AC125437.2-201ENST00000625180 2167 ntBASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CSNK1G3Q9Y6M4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 AC093525.10-201ENST00000625130 1569 ntBASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 MIR662-201ENST00000384847 95 ntBASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 TPM4P1-201ENST00000436100 807 ntBASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 AC104390.1-201ENST00000555663 520 ntBASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 AC092329.2-201ENST00000598402 547 ntBASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 AL136038.4-201ENST00000603606 1261 ntBASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 AL691432.3-201ENST00000621860 400 ntBASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 AC079602.3-201ENST00000623931 403 ntBASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CSNK1G3Q9Y6M4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.27■□□□□ 0.51
CSNK1G3Q9Y6M4 RCC2P3-201ENST00000418112 1537 ntBASIC18.27■□□□□ 0.51
CSNK1G3Q9Y6M4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CSNK1G3Q9Y6M4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CSNK1G3Q9Y6M4 AC016734.2-201ENST00000624325 1377 ntBASIC18.27■□□□□ 0.51
CSNK1G3Q9Y6M4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CSNK1G3Q9Y6M4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.27■□□□□ 0.51
CSNK1G3Q9Y6M4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CSNK1G3Q9Y6M4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms