Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
KCNE3Q9Y6H6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
KCNE3Q9Y6H6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
KCNE3Q9Y6H6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 AC135050.7-201ENST00000624508 2218 ntBASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 GPAT2P1-201ENST00000444924 1672 ntBASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
KCNE3Q9Y6H6 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 AC079598.2-202ENST00000546624 1451 ntBASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 AL023284.2-201ENST00000405850 579 ntBASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 RBM17P1-201ENST00000453646 1190 ntBASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
KCNE3Q9Y6H6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 AC073592.3-201ENST00000625118 1834 ntBASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
KCNE3Q9Y6H6 BICD1-207ENST00000551848 1962 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms