Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 AL590326.2-201ENST00000625139 305 ntBASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 AC083906.6-201ENST00000641366 219 ntBASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SNX9Q9Y5X1 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 MIR564-202ENST00000385049 94 ntBASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 AC022616.7-201ENST00000525383 220 ntBASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 GCSHP2-201ENST00000560971 527 ntBASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 AC006333.2-201ENST00000607957 2099 ntBASIC20.02■□□□□ 0.8
SNX9Q9Y5X1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.02■□□□□ 0.79
SNX9Q9Y5X1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
SNX9Q9Y5X1 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SNX9Q9Y5X1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SNX9Q9Y5X1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 AC024243.1-201ENST00000609234 778 ntBASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 MTMR9LP-203ENST00000426597 1545 ntBASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SNX9Q9Y5X1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX9Q9Y5X1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNX9Q9Y5X1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX9Q9Y5X1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SNX9Q9Y5X1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNX9Q9Y5X1 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 AL357033.4-201ENST00000617703 1807 ntBASIC20■□□□□ 0.79
SNX9Q9Y5X1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX9Q9Y5X1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SNX9Q9Y5X1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 AC092647.4-201ENST00000457211 535 ntBASIC20■□□□□ 0.79
SNX9Q9Y5X1 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 NTF6B-201ENST00000591913 560 ntBASIC20■□□□□ 0.79
SNX9Q9Y5X1 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20■□□□□ 0.79
SNX9Q9Y5X1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNX9Q9Y5X1 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20■□□□□ 0.79
SNX9Q9Y5X1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SNX9Q9Y5X1 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 KRT18P35-201ENST00000510488 1269 ntBASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 AL445228.2-201ENST00000605589 952 ntBASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 AC112497.1-201ENST00000624824 639 ntBASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.99■□□□□ 0.79
SNX9Q9Y5X1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms