Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 AC138028.4-201ENST00000564984 1845 ntBASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAPPC1Q9Y5R8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAPPC1Q9Y5R8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.21□□□□□ -0.14
TRAPPC1Q9Y5R8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.21□□□□□ -0.14
TRAPPC1Q9Y5R8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAPPC1Q9Y5R8 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAPPC1Q9Y5R8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 AL138724.1-201ENST00000606771 1088 ntBASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 MIR4787-201ENST00000607364 84 ntBASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 AL356652.1-201ENST00000615962 565 ntBASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAPPC1Q9Y5R8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 AC136469.2-201ENST00000623944 1028 ntBASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 AL513477.1-201ENST00000602865 2407 ntBASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRAPPC1Q9Y5R8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
TRAPPC1Q9Y5R8 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms