Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 RASA4DP-201ENST00000460726 1199 ntBASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHGA9Q9Y5G4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHGA9Q9Y5G4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 TSPY21P-201ENST00000433481 731 ntBASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHGA9Q9Y5G4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHGA9Q9Y5G4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms