Protein–RNA interactions for Protein: Q9Y5B6

PAXBP1, PAX3- and PAX7-binding protein 1, humanhuman

Predictions only

Length 917 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1Q9Y5B6 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PAXBP1Q9Y5B6 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PAXBP1Q9Y5B6 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.66■□□□□ 0.9
PAXBP1Q9Y5B6 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PAXBP1Q9Y5B6 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PAXBP1Q9Y5B6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PAXBP1Q9Y5B6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 HTR7P1-202ENST00000624664 4411 ntBASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 ESRRAP1-201ENST00000400596 1257 ntBASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 RPS2P52-201ENST00000469610 820 ntBASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PAXBP1Q9Y5B6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PAXBP1Q9Y5B6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
PAXBP1Q9Y5B6 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.64■□□□□ 0.9
PAXBP1Q9Y5B6 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PAXBP1Q9Y5B6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PAXBP1Q9Y5B6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PAXBP1Q9Y5B6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PAXBP1Q9Y5B6 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PAXBP1Q9Y5B6 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
PAXBP1Q9Y5B6 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PAXBP1Q9Y5B6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 FAM201B-201ENST00000458407 597 ntBASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 AC124067.4-201ENST00000519691 2379 ntBASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PAXBP1Q9Y5B6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 AC141586.5-201ENST00000624546 2050 ntBASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 POU5F1P3-201ENST00000428824 1078 ntBASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC20.62■□□□□ 0.89
PAXBP1Q9Y5B6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms