Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT52Q9Y366 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.53■□□□□ 0.4
IFT52Q9Y366 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT52Q9Y366 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IFT52Q9Y366 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT52Q9Y366 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
IFT52Q9Y366 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.53■□□□□ 0.4
IFT52Q9Y366 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT52Q9Y366 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT52Q9Y366 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.53■□□□□ 0.4
IFT52Q9Y366 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.53■□□□□ 0.4
IFT52Q9Y366 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
IFT52Q9Y366 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT52Q9Y366 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.53■□□□□ 0.4
IFT52Q9Y366 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT52Q9Y366 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
IFT52Q9Y366 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT52Q9Y366 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT52Q9Y366 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT52Q9Y366 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT52Q9Y366 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT52Q9Y366 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT52Q9Y366 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT52Q9Y366 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 NIFKP9-201ENST00000419265 221 ntBASIC17.52■□□□□ 0.4
IFT52Q9Y366 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IFT52Q9Y366 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IFT52Q9Y366 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 AL353708.3-201ENST00000610272 989 ntBASIC17.52■□□□□ 0.4
IFT52Q9Y366 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
IFT52Q9Y366 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
IFT52Q9Y366 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
IFT52Q9Y366 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT52Q9Y366 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.52■□□□□ 0.39
IFT52Q9Y366 AL139384.1-201ENST00000612143 3047 ntBASIC17.52■□□□□ 0.39
IFT52Q9Y366 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT52Q9Y366 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
IFT52Q9Y366 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT52Q9Y366 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.52■□□□□ 0.39
IFT52Q9Y366 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
IFT52Q9Y366 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 AL353807.1-201ENST00000427475 662 ntBASIC17.51■□□□□ 0.39
IFT52Q9Y366 AP002982.1-201ENST00000492365 877 ntBASIC17.51■□□□□ 0.39
IFT52Q9Y366 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 AC012313.1-201ENST00000593393 3059 ntBASIC17.51■□□□□ 0.39
IFT52Q9Y366 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 BICD1-207ENST00000551848 1962 ntBASIC17.51■□□□□ 0.39
IFT52Q9Y366 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
IFT52Q9Y366 NOC2LP2-201ENST00000407594 1944 ntBASIC17.51■□□□□ 0.39
IFT52Q9Y366 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.51■□□□□ 0.39
IFT52Q9Y366 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT52Q9Y366 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IFT52Q9Y366 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.5■□□□□ 0.39
IFT52Q9Y366 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT52Q9Y366 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
IFT52Q9Y366 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
IFT52Q9Y366 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
IFT52Q9Y366 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT52Q9Y366 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT52Q9Y366 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
IFT52Q9Y366 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT52Q9Y366 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.5■□□□□ 0.39
IFT52Q9Y366 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
IFT52Q9Y366 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms