Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 AC125437.2-201ENST00000625180 2167 ntBASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 ATP5G2P1-201ENST00000433580 426 ntBASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 BX276092.5-203ENST00000456199 560 ntBASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 AL121672.3-201ENST00000608644 468 ntBASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NCKAP1Q9Y2A7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 AC011498.5-201ENST00000592027 486 ntBASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 AL136038.4-201ENST00000603606 1261 ntBASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 FP475955.4-201ENST00000623131 1990 ntBASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NCKAP1Q9Y2A7 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 IRX1P1-201ENST00000438849 1838 ntBASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 MIR564-202ENST00000385049 94 ntBASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 AC104390.1-201ENST00000555663 520 ntBASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 HOXB1-202ENST00000577092 1414 ntBASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NCKAP1Q9Y2A7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 KRT8P32-201ENST00000512863 1461 ntBASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.71■□□□□ 0.59
NCKAP1Q9Y2A7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms