Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC24.44■■□□□ 1.5
SPG7Q9UQ90 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 AC104819.1-201ENST00000504587 486 ntBASIC24.43■■□□□ 1.5
SPG7Q9UQ90 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 GPR32P1-201ENST00000601788 811 ntBASIC24.43■■□□□ 1.5
SPG7Q9UQ90 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 CYP51A1P1-201ENST00000492267 1507 ntBASIC24.43■■□□□ 1.5
SPG7Q9UQ90 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.43■■□□□ 1.5
SPG7Q9UQ90 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 KRT18P31-201ENST00000506277 1292 ntBASIC24.42■■□□□ 1.5
SPG7Q9UQ90 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 LINC01711-201ENST00000598340 967 ntBASIC24.42■■□□□ 1.5
SPG7Q9UQ90 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SPG7Q9UQ90 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 AC141586.3-201ENST00000562166 1838 ntBASIC24.41■■□□□ 1.5
SPG7Q9UQ90 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 AC068587.9-201ENST00000641814 219 ntBASIC24.41■■□□□ 1.5
SPG7Q9UQ90 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
SPG7Q9UQ90 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 IGHGP-201ENST00000390555 1178 ntBASIC24.4■■□□□ 1.5
SPG7Q9UQ90 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 TK1-205ENST00000590862 642 ntTSL 3 BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 AL031008.1-201ENST00000619963 541 ntBASIC24.4■■□□□ 1.5
SPG7Q9UQ90 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
SPG7Q9UQ90 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SPG7Q9UQ90 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SPG7Q9UQ90 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SPG7Q9UQ90 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC24.39■■□□□ 1.5
SPG7Q9UQ90 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SPG7Q9UQ90 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SPG7Q9UQ90 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SPG7Q9UQ90 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC24.39■■□□□ 1.49
SPG7Q9UQ90 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC24.39■■□□□ 1.49
SPG7Q9UQ90 AC074051.2-201ENST00000565115 352 ntBASIC24.39■■□□□ 1.49
SPG7Q9UQ90 TEN1-204ENST00000588202 862 ntTSL 3 BASIC24.39■■□□□ 1.49
SPG7Q9UQ90 AC024563.2-201ENST00000603282 481 ntBASIC24.39■■□□□ 1.49
SPG7Q9UQ90 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC24.39■■□□□ 1.49
SPG7Q9UQ90 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
SPG7Q9UQ90 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SPG7Q9UQ90 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
SPG7Q9UQ90 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms