Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 AC112907.2-201ENST00000448639 330 ntBASIC19.78■□□□□ 0.76
CDH9Q9ULB4 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDH9Q9ULB4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.77■□□□□ 0.76
CDH9Q9ULB4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.77■□□□□ 0.75
CDH9Q9ULB4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
CDH9Q9ULB4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
CDH9Q9ULB4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
CDH9Q9ULB4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 MIR3917-201ENST00000580971 93 ntBASIC19.76■□□□□ 0.75
CDH9Q9ULB4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 HYMAI.1-201ENST00000620949 238 ntBASIC19.76■□□□□ 0.75
CDH9Q9ULB4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CDH9Q9ULB4 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 KRT18P41-201ENST00000518924 1277 ntBASIC19.75■□□□□ 0.75
CDH9Q9ULB4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 AC010240.3-201ENST00000607688 395 ntBASIC19.75■□□□□ 0.75
CDH9Q9ULB4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 AL121956.5-201ENST00000625261 221 ntBASIC19.75■□□□□ 0.75
CDH9Q9ULB4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CDH9Q9ULB4 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.75■□□□□ 0.75
CDH9Q9ULB4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms