Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.82■□□□□ 0.12
UBQLN2Q9UHD9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 DBI-210ENST00000542275 757 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
UBQLN2Q9UHD9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 AC108860.2-201ENST00000562760 2183 ntBASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
UBQLN2Q9UHD9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 KRT8P36-201ENST00000489121 1440 ntBASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.79■□□□□ 0.12
UBQLN2Q9UHD9 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN2Q9UHD9 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN2Q9UHD9 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
UBQLN2Q9UHD9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.78■□□□□ 0.12
UBQLN2Q9UHD9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.78■□□□□ 0.12
UBQLN2Q9UHD9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN2Q9UHD9 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
UBQLN2Q9UHD9 ANO7L1-203ENST00000602586 1720 ntBASIC15.78■□□□□ 0.12
UBQLN2Q9UHD9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms