Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 AC112497.1-201ENST00000624824 639 ntBASIC17.61■□□□□ 0.41
CTSFQ9UBX1 AL121956.5-201ENST00000625261 221 ntBASIC17.61■□□□□ 0.41
CTSFQ9UBX1 AC026471.1-201ENST00000564629 3026 ntBASIC17.61■□□□□ 0.41
CTSFQ9UBX1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CTSFQ9UBX1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 RASA4DP-201ENST00000460726 1199 ntBASIC17.6■□□□□ 0.41
CTSFQ9UBX1 SEC1P-202ENST00000473944 940 ntBASIC17.6■□□□□ 0.41
CTSFQ9UBX1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 AC083849.1-201ENST00000615227 514 ntBASIC17.6■□□□□ 0.41
CTSFQ9UBX1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 HYMAI.1-201ENST00000620949 238 ntBASIC17.6■□□□□ 0.41
CTSFQ9UBX1 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CTSFQ9UBX1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.59■□□□□ 0.41
CTSFQ9UBX1 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 AC034232.1-201ENST00000506026 1064 ntBASIC17.59■□□□□ 0.41
CTSFQ9UBX1 FAM86EP-206ENST00000510506 987 ntBASIC17.59■□□□□ 0.41
CTSFQ9UBX1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 AC091076.1-201ENST00000610741 619 ntBASIC17.59■□□□□ 0.41
CTSFQ9UBX1 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CTSFQ9UBX1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CTSFQ9UBX1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.58■□□□□ 0.41
CTSFQ9UBX1 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.58■□□□□ 0.41
CTSFQ9UBX1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CTSFQ9UBX1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CTSFQ9UBX1 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CTSFQ9UBX1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.58■□□□□ 0.41
CTSFQ9UBX1 LINC01311-201ENST00000565162 1445 ntBASIC17.58■□□□□ 0.41
CTSFQ9UBX1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSFQ9UBX1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTSFQ9UBX1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.58■□□□□ 0.4
CTSFQ9UBX1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.58■□□□□ 0.4
CTSFQ9UBX1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.58■□□□□ 0.4
CTSFQ9UBX1 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.58■□□□□ 0.4
CTSFQ9UBX1 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CTSFQ9UBX1 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.58■□□□□ 0.4
CTSFQ9UBX1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CTSFQ9UBX1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.58■□□□□ 0.4
CTSFQ9UBX1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CTSFQ9UBX1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.57■□□□□ 0.4
CTSFQ9UBX1 MIR564-202ENST00000385049 94 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms