Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COMMD3Q9UBI1 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 OR6D1P-203ENST00000641209 4860 ntBASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 AC123595.1-201ENST00000440769 1046 ntBASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 CYP2T3P-201ENST00000601990 817 ntBASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 AC110285.6-201ENST00000617652 491 ntBASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 AC013268.1-206ENST00000638368 961 ntBASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 AC112229.1-201ENST00000639295 961 ntBASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
COMMD3Q9UBI1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 KRT18P14-201ENST00000534205 1250 ntBASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 AC008406.3-201ENST00000620001 1374 ntBASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COMMD3Q9UBI1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COMMD3Q9UBI1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
COMMD3Q9UBI1 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COMMD3Q9UBI1 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
COMMD3Q9UBI1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
COMMD3Q9UBI1 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COMMD3Q9UBI1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms