Protein–RNA interactions for Protein: Q9NXL2

ARHGEF38, Rho guanine nucleotide exchange factor 38, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF38Q9NXL2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ARHGEF38Q9NXL2 AC008556.1-201ENST00000610908 2040 ntBASIC19.46■□□□□ 0.71
ARHGEF38Q9NXL2 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 MTMR9LP-203ENST00000426597 1545 ntBASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ARHGEF38Q9NXL2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 AC010203.1-204ENST00000548782 407 ntBASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 MIR3180-5-201ENST00000583743 153 ntBASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.44■□□□□ 0.7
ARHGEF38Q9NXL2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 AC073508.3-201ENST00000619697 1419 ntBASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 TERF1P1-201ENST00000311003 1181 ntBASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 AL512604.3-201ENST00000569583 964 ntBASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 AL138966.2-201ENST00000621997 464 ntBASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.43■□□□□ 0.7
ARHGEF38Q9NXL2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.42■□□□□ 0.7
ARHGEF38Q9NXL2 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ARHGEF38Q9NXL2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF38Q9NXL2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
ARHGEF38Q9NXL2 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF38Q9NXL2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF38Q9NXL2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF38Q9NXL2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ARHGEF38Q9NXL2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ARHGEF38Q9NXL2 AC093525.10-201ENST00000625130 1569 ntBASIC19.42■□□□□ 0.7
ARHGEF38Q9NXL2 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms