Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 AC097493.4-201ENST00000641197 219 ntBASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 AC092338.2-201ENST00000568827 1415 ntBASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PARPBPQ9NWS1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 AL161938.1-201ENST00000569833 2180 ntBASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 AC007663.1-201ENST00000438948 1240 ntBASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PARPBPQ9NWS1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 AC018445.3-201ENST00000624177 1945 ntBASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PARPBPQ9NWS1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 BX323043.1-201ENST00000641006 1765 ntBASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 HMGA1P5-201ENST00000412453 271 ntBASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 AP003041.3-201ENST00000527151 707 ntBASIC16.72■□□□□ 0.27
PARPBPQ9NWS1 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms