Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.45■□□□□ 0.38
RLIMQ9NVW2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.45■□□□□ 0.38
RLIMQ9NVW2 AL353708.3-201ENST00000610272 989 ntBASIC17.45■□□□□ 0.38
RLIMQ9NVW2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RLIMQ9NVW2 AL359736.2-201ENST00000621992 437 ntBASIC17.45■□□□□ 0.38
RLIMQ9NVW2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RLIMQ9NVW2 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RLIMQ9NVW2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RLIMQ9NVW2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
RLIMQ9NVW2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 KRT18P29-201ENST00000397031 1267 ntBASIC17.44■□□□□ 0.38
RLIMQ9NVW2 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 KSR1P1-201ENST00000446298 240 ntBASIC17.44■□□□□ 0.38
RLIMQ9NVW2 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 AF186192.3-201ENST00000583427 947 ntBASIC17.44■□□□□ 0.38
RLIMQ9NVW2 ITM2C-210ENST00000620962 501 ntBASIC17.44■□□□□ 0.38
RLIMQ9NVW2 CR392000.1-201ENST00000624770 1228 ntBASIC17.44■□□□□ 0.38
RLIMQ9NVW2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.44■□□□□ 0.38
RLIMQ9NVW2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 FAM197Y4-202ENST00000622692 608 ntBASIC17.43■□□□□ 0.38
RLIMQ9NVW2 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 ABALON-201ENST00000629058 1903 ntBASIC17.43■□□□□ 0.38
RLIMQ9NVW2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RLIMQ9NVW2 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 FZD10-202ENST00000539839 3282 ntBASIC17.42■□□□□ 0.38
RLIMQ9NVW2 RCC2P6-201ENST00000526625 1557 ntBASIC17.42■□□□□ 0.38
RLIMQ9NVW2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 KRT16P1-201ENST00000399124 1418 ntBASIC17.42■□□□□ 0.38
RLIMQ9NVW2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.42■□□□□ 0.38
RLIMQ9NVW2 AL353807.1-201ENST00000427475 662 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms