Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NEFHP1-201ENST00000412845 2629 ntBASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 AC090164.3-201ENST00000610780 2143 ntBASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 LINC01568-207ENST00000641790 1380 ntBASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
BLOC1S4Q9NUP1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 AC128688.1-201ENST00000487626 519 ntBASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 AC012306.2-201ENST00000609350 630 ntBASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
BLOC1S4Q9NUP1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 AC112777.1-201ENST00000540175 1423 ntBASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 AC034236.2-201ENST00000606662 1610 ntBASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
BLOC1S4Q9NUP1 KRT8P50-201ENST00000562022 1438 ntBASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 AC145285.6-201ENST00000604632 637 ntBASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
BLOC1S4Q9NUP1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 AC073912.3-201ENST00000624414 853 ntBASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
BLOC1S4Q9NUP1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms