Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX4Q9NQI0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX4Q9NQI0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX4Q9NQI0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX4Q9NQI0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX4Q9NQI0 AL390719.2-201ENST00000606993 987 ntBASIC22.08■■□□□ 1.13
DDX4Q9NQI0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
DDX4Q9NQI0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.08■■□□□ 1.13
DDX4Q9NQI0 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
DDX4Q9NQI0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC22.08■■□□□ 1.12
DDX4Q9NQI0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
DDX4Q9NQI0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
DDX4Q9NQI0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.08■■□□□ 1.12
DDX4Q9NQI0 AL049812.1-201ENST00000432563 2267 ntBASIC22.08■■□□□ 1.12
DDX4Q9NQI0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.07■■□□□ 1.12
DDX4Q9NQI0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 DRAXINP1-201ENST00000437611 948 ntBASIC22.06■■□□□ 1.12
DDX4Q9NQI0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 MIR3180-4-201ENST00000582223 153 ntBASIC22.06■■□□□ 1.12
DDX4Q9NQI0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 KRT8P50-201ENST00000562022 1438 ntBASIC22.06■■□□□ 1.12
DDX4Q9NQI0 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
DDX4Q9NQI0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 AL161938.1-201ENST00000569833 2180 ntBASIC22.05■■□□□ 1.12
DDX4Q9NQI0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 AP003733.1-201ENST00000491725 852 ntBASIC22.05■■□□□ 1.12
DDX4Q9NQI0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 RN7SL510P-201ENST00000581311 263 ntBASIC22.05■■□□□ 1.12
DDX4Q9NQI0 TBCB-205ENST00000585746 875 ntTSL 3 BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 TK1-205ENST00000590862 642 ntTSL 3 BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 AL691432.3-201ENST00000621860 400 ntBASIC22.05■■□□□ 1.12
DDX4Q9NQI0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
DDX4Q9NQI0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 AC246785.2-201ENST00000432512 513 ntBASIC22.04■■□□□ 1.12
DDX4Q9NQI0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.04■■□□□ 1.12
DDX4Q9NQI0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms