Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 UBE2SP1-201ENST00000450587 669 ntBASIC16.92■□□□□ 0.3
HINT3Q9NQE9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HINT3Q9NQE9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 MTMR9LP-203ENST00000426597 1545 ntBASIC16.91■□□□□ 0.3
HINT3Q9NQE9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 AC067852.2-201ENST00000590513 2313 ntBASIC16.91■□□□□ 0.3
HINT3Q9NQE9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 KRASP1-201ENST00000407852 552 ntBASIC16.91■□□□□ 0.3
HINT3Q9NQE9 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 AC066615.1-201ENST00000640911 628 ntBASIC16.91■□□□□ 0.3
HINT3Q9NQE9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.91■□□□□ 0.3
HINT3Q9NQE9 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HINT3Q9NQE9 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 AC133681.1-201ENST00000465482 601 ntBASIC16.9■□□□□ 0.3
HINT3Q9NQE9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 AC124016.1-201ENST00000609552 612 ntBASIC16.9■□□□□ 0.3
HINT3Q9NQE9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
HINT3Q9NQE9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms