Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.93■□□□□ 0.94
VTA1Q9NP79 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.93■□□□□ 0.94
VTA1Q9NP79 AC246785.2-201ENST00000432512 513 ntBASIC20.93■□□□□ 0.94
VTA1Q9NP79 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.93■□□□□ 0.94
VTA1Q9NP79 GPR32P1-201ENST00000601788 811 ntBASIC20.93■□□□□ 0.94
VTA1Q9NP79 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VTA1Q9NP79 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTA1Q9NP79 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTA1Q9NP79 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VTA1Q9NP79 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VTA1Q9NP79 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VTA1Q9NP79 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTA1Q9NP79 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTA1Q9NP79 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTA1Q9NP79 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTA1Q9NP79 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VTA1Q9NP79 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTA1Q9NP79 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 AC024563.2-201ENST00000603282 481 ntBASIC20.92■□□□□ 0.94
VTA1Q9NP79 IFNL4P1-201ENST00000607083 540 ntBASIC20.92■□□□□ 0.94
VTA1Q9NP79 AL121772.3-201ENST00000610840 674 ntBASIC20.92■□□□□ 0.94
VTA1Q9NP79 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VTA1Q9NP79 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTA1Q9NP79 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
VTA1Q9NP79 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTA1Q9NP79 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VTA1Q9NP79 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VTA1Q9NP79 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTA1Q9NP79 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VTA1Q9NP79 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VTA1Q9NP79 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VTA1Q9NP79 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTA1Q9NP79 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTA1Q9NP79 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VTA1Q9NP79 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTA1Q9NP79 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.91■□□□□ 0.94
VTA1Q9NP79 IGHGP-201ENST00000390555 1178 ntBASIC20.91■□□□□ 0.94
VTA1Q9NP79 KRT17P6-201ENST00000453795 1220 ntBASIC20.91■□□□□ 0.94
VTA1Q9NP79 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.91■□□□□ 0.94
VTA1Q9NP79 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.91■□□□□ 0.94
VTA1Q9NP79 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTA1Q9NP79 IGHV3-41-201ENST00000613121 348 ntBASIC20.91■□□□□ 0.94
VTA1Q9NP79 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.91■□□□□ 0.94
VTA1Q9NP79 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VTA1Q9NP79 PCDHAC2-203ENST00000615316 3011 ntBASIC20.91■□□□□ 0.94
VTA1Q9NP79 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
VTA1Q9NP79 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTA1Q9NP79 Z98044.1-201ENST00000632503 1764 ntBASIC20.9■□□□□ 0.94
VTA1Q9NP79 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTA1Q9NP79 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
VTA1Q9NP79 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTA1Q9NP79 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTA1Q9NP79 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.9■□□□□ 0.94
VTA1Q9NP79 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VTA1Q9NP79 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTA1Q9NP79 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.9■□□□□ 0.94
VTA1Q9NP79 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.9■□□□□ 0.94
VTA1Q9NP79 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VTA1Q9NP79 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.9■□□□□ 0.94
VTA1Q9NP79 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.9■□□□□ 0.94
VTA1Q9NP79 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.9■□□□□ 0.94
VTA1Q9NP79 AL158211.5-201ENST00000623583 2518 ntBASIC20.9■□□□□ 0.94
VTA1Q9NP79 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTA1Q9NP79 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTA1Q9NP79 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTA1Q9NP79 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.9■□□□□ 0.94
VTA1Q9NP79 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.9■□□□□ 0.94
VTA1Q9NP79 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VTA1Q9NP79 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.9■□□□□ 0.94
VTA1Q9NP79 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
VTA1Q9NP79 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
VTA1Q9NP79 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.89■□□□□ 0.94
VTA1Q9NP79 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.89■□□□□ 0.94
VTA1Q9NP79 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VTA1Q9NP79 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.89■□□□□ 0.94
VTA1Q9NP79 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
VTA1Q9NP79 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VTA1Q9NP79 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
VTA1Q9NP79 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.89■□□□□ 0.93
VTA1Q9NP79 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VTA1Q9NP79 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VTA1Q9NP79 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VTA1Q9NP79 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.89■□□□□ 0.93
VTA1Q9NP79 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VTA1Q9NP79 FDX1P1-201ENST00000449115 551 ntBASIC20.89■□□□□ 0.93
VTA1Q9NP79 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC20.89■□□□□ 0.93
VTA1Q9NP79 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms