Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCQ9H7C4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SYNCQ9H7C4 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCQ9H7C4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SYNCQ9H7C4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNCQ9H7C4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SYNCQ9H7C4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 AP000525.1-201ENST00000608286 694 ntBASIC19.95■□□□□ 0.78
SYNCQ9H7C4 AC083906.6-201ENST00000641366 219 ntBASIC19.95■□□□□ 0.78
SYNCQ9H7C4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNCQ9H7C4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 KRT8P3-201ENST00000519669 1449 ntBASIC19.94■□□□□ 0.78
SYNCQ9H7C4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SYNCQ9H7C4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 AL355075.4-201ENST00000554988 638 ntBASIC19.93■□□□□ 0.78
SYNCQ9H7C4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SYNCQ9H7C4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SYNCQ9H7C4 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms