Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.55■■□□□ 1.04
RPAP3Q9H6T3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 AP000867.3-201ENST00000524675 377 ntBASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RPAP3Q9H6T3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 TOB2P1-201ENST00000469761 992 ntBASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 MIR3180-4-201ENST00000582223 153 ntBASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 AL390719.2-201ENST00000606993 987 ntBASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RPAP3Q9H6T3 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.52■■□□□ 1.04
RPAP3Q9H6T3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.52■■□□□ 1.03
RPAP3Q9H6T3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
RPAP3Q9H6T3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 AC004870.1-201ENST00000315132 882 ntBASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 AL732292.2-201ENST00000609649 430 ntBASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.51■■□□□ 1.03
RPAP3Q9H6T3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 IFNL4P1-201ENST00000607083 540 ntBASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RPAP3Q9H6T3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RPAP3Q9H6T3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms