Protein–RNA interactions for Protein: Q9H3W5

LRRN3, Leucine-rich repeat neuronal protein 3, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3Q9H3W5 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRRN3Q9H3W5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 NPAP1P7-201ENST00000613027 823 ntBASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRRN3Q9H3W5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRN3Q9H3W5 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRRN3Q9H3W5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LRRN3Q9H3W5 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRN3Q9H3W5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRN3Q9H3W5 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRN3Q9H3W5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.08■□□□□ 0.49
LRRN3Q9H3W5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRN3Q9H3W5 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRRN3Q9H3W5 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.08■□□□□ 0.49
LRRN3Q9H3W5 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 BX276092.5-203ENST00000456199 560 ntBASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 AC011498.5-201ENST00000592027 486 ntBASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 AC092119.3-201ENST00000612618 583 ntBASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 AC012313.10-201ENST00000623509 926 ntBASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LRRN3Q9H3W5 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LRRN3Q9H3W5 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms