Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 FEM1AP3-201ENST00000403722 1741 ntBASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
KRTAP4-3Q9BYR4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 STARP1-201ENST00000397973 869 ntBASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 HOMER2P1-201ENST00000455653 964 ntBASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 LINC01238-205ENST00000567549 1107 ntBASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 MIR3180-5-201ENST00000583743 153 ntBASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CLEC4GP1-201ENST00000596555 870 ntBASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 FGF14-AS2-201ENST00000606448 1074 ntBASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 AL121956.5-201ENST00000625261 221 ntBASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
KRTAP4-3Q9BYR4 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms