Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 BX276092.5-203ENST00000456199 560 ntBASIC19.51■□□□□ 0.71
LRRC3Q9BY71 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
LRRC3Q9BY71 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 KRT8P26-201ENST00000534154 1276 ntBASIC19.5■□□□□ 0.71
LRRC3Q9BY71 RNF126P1-202ENST00000569893 925 ntBASIC19.5■□□□□ 0.71
LRRC3Q9BY71 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 AC092329.2-201ENST00000598402 547 ntBASIC19.5■□□□□ 0.71
LRRC3Q9BY71 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LRRC3Q9BY71 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 AC068587.9-201ENST00000641814 219 ntBASIC19.49■□□□□ 0.71
LRRC3Q9BY71 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC3Q9BY71 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
LRRC3Q9BY71 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms