Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.32
UPK3BQ9BT76 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 INGX-201ENST00000359239 846 ntBASIC13.02□□□□□ -0.33
UPK3BQ9BT76 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 BX664615.1-201ENST00000443558 458 ntBASIC13.02□□□□□ -0.33
UPK3BQ9BT76 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 AC010203.1-204ENST00000548782 407 ntBASIC13.02□□□□□ -0.33
UPK3BQ9BT76 AC010331.1-201ENST00000611423 582 ntBASIC13.02□□□□□ -0.33
UPK3BQ9BT76 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC13.02□□□□□ -0.33
UPK3BQ9BT76 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 KRT18P57-201ENST00000443599 1254 ntBASIC13.01□□□□□ -0.33
UPK3BQ9BT76 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 AL590326.2-201ENST00000625139 305 ntBASIC13.01□□□□□ -0.33
UPK3BQ9BT76 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
UPK3BQ9BT76 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13□□□□□ -0.33
UPK3BQ9BT76 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
UPK3BQ9BT76 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13□□□□□ -0.33
UPK3BQ9BT76 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UPK3BQ9BT76 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
UPK3BQ9BT76 GAS2L1P1-201ENST00000420145 1480 ntBASIC13□□□□□ -0.33
UPK3BQ9BT76 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13□□□□□ -0.33
UPK3BQ9BT76 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UPK3BQ9BT76 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
UPK3BQ9BT76 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC13□□□□□ -0.33
UPK3BQ9BT76 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms