Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PTPN18Q99952 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.42■■□□□ 1.02
PTPN18Q99952 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC21.42■■□□□ 1.02
PTPN18Q99952 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.42■■□□□ 1.02
PTPN18Q99952 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC21.42■■□□□ 1.02
PTPN18Q99952 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.42■■□□□ 1.02
PTPN18Q99952 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PTPN18Q99952 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC21.42■■□□□ 1.02
PTPN18Q99952 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC21.42■■□□□ 1.02
PTPN18Q99952 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PTPN18Q99952 AC116407.3-201ENST00000623905 1129 ntBASIC21.42■■□□□ 1.02
PTPN18Q99952 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PTPN18Q99952 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
PTPN18Q99952 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.41■■□□□ 1.02
PTPN18Q99952 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 Z82202.1-201ENST00000623446 1880 ntBASIC21.41■■□□□ 1.02
PTPN18Q99952 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.41■■□□□ 1.02
PTPN18Q99952 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 HMGN1P19-201ENST00000436976 333 ntBASIC21.41■■□□□ 1.02
PTPN18Q99952 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC21.41■■□□□ 1.02
PTPN18Q99952 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC21.41■■□□□ 1.02
PTPN18Q99952 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.41■■□□□ 1.02
PTPN18Q99952 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.41■■□□□ 1.02
PTPN18Q99952 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC21.41■■□□□ 1.02
PTPN18Q99952 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC21.41■■□□□ 1.02
PTPN18Q99952 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC21.41■■□□□ 1.02
PTPN18Q99952 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC21.41■■□□□ 1.02
PTPN18Q99952 PRKN-208ENST00000610470 531 ntTSL 2 BASIC21.41■■□□□ 1.02
PTPN18Q99952 PRKN-209ENST00000612485 225 ntTSL 5 BASIC21.41■■□□□ 1.02
PTPN18Q99952 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 AC114341.1-201ENST00000618070 349 ntBASIC21.41■■□□□ 1.02
PTPN18Q99952 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC21.41■■□□□ 1.02
PTPN18Q99952 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
PTPN18Q99952 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.41■■□□□ 1.02
PTPN18Q99952 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PTPN18Q99952 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
PTPN18Q99952 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN18Q99952 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PTPN18Q99952 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.4■■□□□ 1.02
PTPN18Q99952 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN18Q99952 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN18Q99952 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN18Q99952 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.4■■□□□ 1.02
PTPN18Q99952 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.4■■□□□ 1.02
PTPN18Q99952 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN18Q99952 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.4■■□□□ 1.02
PTPN18Q99952 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN18Q99952 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.4■■□□□ 1.02
PTPN18Q99952 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.4■■□□□ 1.02
PTPN18Q99952 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.4■■□□□ 1.02
PTPN18Q99952 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC21.4■■□□□ 1.02
PTPN18Q99952 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.4■■□□□ 1.02
PTPN18Q99952 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC21.4■■□□□ 1.02
PTPN18Q99952 AC096582.2-201ENST00000510860 516 ntBASIC21.4■■□□□ 1.02
PTPN18Q99952 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC21.4■■□□□ 1.02
PTPN18Q99952 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.4■■□□□ 1.02
PTPN18Q99952 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PTPN18Q99952 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC21.4■■□□□ 1.02
PTPN18Q99952 AC007375.3-201ENST00000600936 2314 ntBASIC21.4■■□□□ 1.02
PTPN18Q99952 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.4■■□□□ 1.02
PTPN18Q99952 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PTPN18Q99952 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.4■■□□□ 1.02
PTPN18Q99952 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PTPN18Q99952 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
PTPN18Q99952 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.02
PTPN18Q99952 ZNF259P1-201ENST00000407656 1365 ntBASIC21.39■■□□□ 1.02
PTPN18Q99952 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.39■■□□□ 1.02
PTPN18Q99952 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
PTPN18Q99952 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN18Q99952 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.39■■□□□ 1.01
PTPN18Q99952 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
PTPN18Q99952 FGFR3P6-201ENST00000457012 610 ntBASIC21.39■■□□□ 1.01
PTPN18Q99952 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.39■■□□□ 1.01
PTPN18Q99952 AL355877.3-201ENST00000622820 899 ntBASIC21.39■■□□□ 1.01
PTPN18Q99952 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN18Q99952 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN18Q99952 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN18Q99952 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTPN18Q99952 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.38■■□□□ 1.01
PTPN18Q99952 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PTPN18Q99952 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTPN18Q99952 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC21.38■■□□□ 1.01
PTPN18Q99952 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.38■■□□□ 1.01
PTPN18Q99952 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms