Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SMOQ99835 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMOQ99835 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SMOQ99835 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.64■□□□□ 0.73
SMOQ99835 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMOQ99835 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMOQ99835 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMOQ99835 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.63■□□□□ 0.73
SMOQ99835 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SMOQ99835 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.63■□□□□ 0.73
SMOQ99835 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMOQ99835 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMOQ99835 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SMOQ99835 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMOQ99835 AC104390.1-201ENST00000555663 520 ntBASIC19.63■□□□□ 0.73
SMOQ99835 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.63■□□□□ 0.73
SMOQ99835 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.63■□□□□ 0.73
SMOQ99835 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.63■□□□□ 0.73
SMOQ99835 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMOQ99835 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMOQ99835 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.63■□□□□ 0.73
SMOQ99835 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMOQ99835 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SMOQ99835 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.63■□□□□ 0.73
SMOQ99835 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SMOQ99835 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMOQ99835 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMOQ99835 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SMOQ99835 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMOQ99835 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.62■□□□□ 0.73
SMOQ99835 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SMOQ99835 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMOQ99835 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMOQ99835 RASA4DP-201ENST00000460726 1199 ntBASIC19.62■□□□□ 0.73
SMOQ99835 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.62■□□□□ 0.73
SMOQ99835 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.62■□□□□ 0.73
SMOQ99835 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.62■□□□□ 0.73
SMOQ99835 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMOQ99835 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMOQ99835 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMOQ99835 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMOQ99835 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.62■□□□□ 0.73
SMOQ99835 AP000974.1-201ENST00000623909 2387 ntBASIC19.62■□□□□ 0.73
SMOQ99835 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SMOQ99835 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMOQ99835 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.62■□□□□ 0.73
SMOQ99835 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.62■□□□□ 0.73
SMOQ99835 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SMOQ99835 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
SMOQ99835 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SMOQ99835 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMOQ99835 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.61■□□□□ 0.73
SMOQ99835 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
SMOQ99835 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMOQ99835 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.61■□□□□ 0.73
SMOQ99835 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SMOQ99835 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.61■□□□□ 0.73
SMOQ99835 AL031133.1-201ENST00000406807 723 ntBASIC19.61■□□□□ 0.73
SMOQ99835 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SMOQ99835 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.61■□□□□ 0.73
SMOQ99835 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.61■□□□□ 0.73
SMOQ99835 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMOQ99835 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
SMOQ99835 HYMAI.1-201ENST00000620949 238 ntBASIC19.61■□□□□ 0.73
SMOQ99835 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMOQ99835 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMOQ99835 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SMOQ99835 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SMOQ99835 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SMOQ99835 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.6■□□□□ 0.73
SMOQ99835 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMOQ99835 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMOQ99835 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMOQ99835 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.6■□□□□ 0.73
SMOQ99835 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMOQ99835 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMOQ99835 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.6■□□□□ 0.73
SMOQ99835 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMOQ99835 AC112907.2-201ENST00000448639 330 ntBASIC19.6■□□□□ 0.73
SMOQ99835 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.6■□□□□ 0.73
SMOQ99835 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMOQ99835 AC087388.1-201ENST00000571370 1112 ntBASIC19.6■□□□□ 0.73
SMOQ99835 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.6■□□□□ 0.73
SMOQ99835 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.6■□□□□ 0.73
SMOQ99835 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SMOQ99835 AL157888.1-201ENST00000631930 593 ntBASIC19.6■□□□□ 0.73
SMOQ99835 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMOQ99835 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SMOQ99835 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.6■□□□□ 0.73
SMOQ99835 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SMOQ99835 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SMOQ99835 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
SMOQ99835 KRT8P50-201ENST00000562022 1438 ntBASIC19.59■□□□□ 0.73
SMOQ99835 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.59■□□□□ 0.73
SMOQ99835 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SMOQ99835 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms