Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 LETM1P2-201ENST00000597330 2178 ntBASIC18.74■□□□□ 0.59
CPNE1Q99829 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.73■□□□□ 0.59
CPNE1Q99829 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE1Q99829 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.73■□□□□ 0.59
CPNE1Q99829 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.73■□□□□ 0.59
CPNE1Q99829 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
CPNE1Q99829 AL357033.4-201ENST00000617703 1807 ntBASIC18.73■□□□□ 0.59
CPNE1Q99829 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE1Q99829 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE1Q99829 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.73■□□□□ 0.59
CPNE1Q99829 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.73■□□□□ 0.59
CPNE1Q99829 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 AL353807.1-201ENST00000427475 662 ntBASIC18.73■□□□□ 0.59
CPNE1Q99829 RPS2P4-201ENST00000476944 856 ntBASIC18.73■□□□□ 0.59
CPNE1Q99829 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CPNE1Q99829 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CPNE1Q99829 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CPNE1Q99829 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.73■□□□□ 0.59
CPNE1Q99829 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CPNE1Q99829 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.73■□□□□ 0.59
CPNE1Q99829 AC073648.6-201ENST00000641589 218 ntBASIC18.73■□□□□ 0.59
CPNE1Q99829 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE1Q99829 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
CPNE1Q99829 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CPNE1Q99829 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CPNE1Q99829 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.73■□□□□ 0.59
CPNE1Q99829 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE1Q99829 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.73■□□□□ 0.59
CPNE1Q99829 KRT8P45-201ENST00000414328 1447 ntBASIC18.73■□□□□ 0.59
CPNE1Q99829 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CPNE1Q99829 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPNE1Q99829 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.73■□□□□ 0.59
CPNE1Q99829 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CPNE1Q99829 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.72■□□□□ 0.59
CPNE1Q99829 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CPNE1Q99829 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.72■□□□□ 0.59
CPNE1Q99829 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CPNE1Q99829 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.72■□□□□ 0.59
CPNE1Q99829 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 KRT16P1-201ENST00000399124 1418 ntBASIC18.72■□□□□ 0.59
CPNE1Q99829 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.72■□□□□ 0.59
CPNE1Q99829 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CPNE1Q99829 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPNE1Q99829 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.71■□□□□ 0.59
CPNE1Q99829 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE1Q99829 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.71■□□□□ 0.59
CPNE1Q99829 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE1Q99829 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.71■□□□□ 0.59
CPNE1Q99829 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE1Q99829 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE1Q99829 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.71■□□□□ 0.59
CPNE1Q99829 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CPNE1Q99829 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE1Q99829 AC026271.3-201ENST00000571884 352 ntBASIC18.71■□□□□ 0.59
CPNE1Q99829 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.71■□□□□ 0.59
CPNE1Q99829 AC006058.3-201ENST00000606217 1069 ntBASIC18.71■□□□□ 0.59
CPNE1Q99829 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
CPNE1Q99829 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE1Q99829 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.71■□□□□ 0.59
CPNE1Q99829 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE1Q99829 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE1Q99829 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE1Q99829 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.71■□□□□ 0.59
CPNE1Q99829 AL133373.2-201ENST00000623187 2828 ntBASIC18.71■□□□□ 0.59
CPNE1Q99829 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPNE1Q99829 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.71■□□□□ 0.59
CPNE1Q99829 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC18.7■□□□□ 0.58
CPNE1Q99829 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CPNE1Q99829 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CPNE1Q99829 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms