Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NPAS1Q99742 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 MTMR9LP-203ENST00000426597 1545 ntBASIC17.03■□□□□ 0.32
NPAS1Q99742 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS1Q99742 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.03■□□□□ 0.32
NPAS1Q99742 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS1Q99742 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.03■□□□□ 0.32
NPAS1Q99742 TSPY17P-201ENST00000450329 467 ntBASIC17.03■□□□□ 0.32
NPAS1Q99742 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.03■□□□□ 0.32
NPAS1Q99742 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 AC010203.1-204ENST00000548782 407 ntBASIC17.03■□□□□ 0.32
NPAS1Q99742 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.03■□□□□ 0.32
NPAS1Q99742 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NPAS1Q99742 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
NPAS1Q99742 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.03■□□□□ 0.32
NPAS1Q99742 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 AC120498.9-201ENST00000339021 3867 ntBASIC17.03■□□□□ 0.32
NPAS1Q99742 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.03■□□□□ 0.32
NPAS1Q99742 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.03■□□□□ 0.32
NPAS1Q99742 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
NPAS1Q99742 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NPAS1Q99742 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
NPAS1Q99742 KRT18P22-201ENST00000402024 1347 ntBASIC17.02■□□□□ 0.32
NPAS1Q99742 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS1Q99742 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS1Q99742 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS1Q99742 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS1Q99742 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.02■□□□□ 0.32
NPAS1Q99742 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS1Q99742 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NPAS1Q99742 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.02■□□□□ 0.32
NPAS1Q99742 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS1Q99742 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS1Q99742 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS1Q99742 HEIH-201ENST00000623091 1652 ntBASIC17.02■□□□□ 0.32
NPAS1Q99742 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS1Q99742 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS1Q99742 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.02■□□□□ 0.32
NPAS1Q99742 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NPAS1Q99742 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS1Q99742 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NPAS1Q99742 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS1Q99742 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
NPAS1Q99742 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
NPAS1Q99742 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS1Q99742 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
NPAS1Q99742 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.02■□□□□ 0.31
NPAS1Q99742 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.02■□□□□ 0.31
NPAS1Q99742 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS1Q99742 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS1Q99742 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS1Q99742 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NPAS1Q99742 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.02■□□□□ 0.31
NPAS1Q99742 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NPAS1Q99742 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NPAS1Q99742 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NPAS1Q99742 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NPAS1Q99742 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.01■□□□□ 0.31
NPAS1Q99742 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NPAS1Q99742 SLC25A3P1-201ENST00000443844 931 ntBASIC17.01■□□□□ 0.31
NPAS1Q99742 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.01■□□□□ 0.31
NPAS1Q99742 LINC01023-201ENST00000606054 436 ntBASIC17.01■□□□□ 0.31
NPAS1Q99742 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NPAS1Q99742 AC083906.6-201ENST00000641366 219 ntBASIC17.01■□□□□ 0.31
NPAS1Q99742 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.01■□□□□ 0.31
NPAS1Q99742 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.01■□□□□ 0.31
NPAS1Q99742 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NPAS1Q99742 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
NPAS1Q99742 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NPAS1Q99742 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
NPAS1Q99742 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
NPAS1Q99742 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms