Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP4Q99727 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP4Q99727 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.17■□□□□ 0.34
TIMP4Q99727 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP4Q99727 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.17■□□□□ 0.34
TIMP4Q99727 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.17■□□□□ 0.34
TIMP4Q99727 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.17■□□□□ 0.34
TIMP4Q99727 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TIMP4Q99727 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP4Q99727 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP4Q99727 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP4Q99727 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.16■□□□□ 0.34
TIMP4Q99727 BX664615.1-201ENST00000443558 458 ntBASIC17.16■□□□□ 0.34
TIMP4Q99727 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.16■□□□□ 0.34
TIMP4Q99727 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
TIMP4Q99727 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.16■□□□□ 0.34
TIMP4Q99727 AL445228.2-201ENST00000605589 952 ntBASIC17.16■□□□□ 0.34
TIMP4Q99727 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TIMP4Q99727 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TIMP4Q99727 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP4Q99727 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TIMP4Q99727 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP4Q99727 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP4Q99727 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP4Q99727 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.16■□□□□ 0.34
TIMP4Q99727 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TIMP4Q99727 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.16■□□□□ 0.34
TIMP4Q99727 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP4Q99727 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP4Q99727 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.16■□□□□ 0.34
TIMP4Q99727 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP4Q99727 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TIMP4Q99727 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.16■□□□□ 0.34
TIMP4Q99727 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
TIMP4Q99727 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TIMP4Q99727 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.15■□□□□ 0.34
TIMP4Q99727 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TIMP4Q99727 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
TIMP4Q99727 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.15■□□□□ 0.34
TIMP4Q99727 TSPY21P-201ENST00000433481 731 ntBASIC17.15■□□□□ 0.34
TIMP4Q99727 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 DUX4L26-201ENST00000489078 1255 ntBASIC17.15■□□□□ 0.34
TIMP4Q99727 AP003041.3-201ENST00000527151 707 ntBASIC17.15■□□□□ 0.34
TIMP4Q99727 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.15■□□□□ 0.34
TIMP4Q99727 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
TIMP4Q99727 AC006011.2-201ENST00000621313 1158 ntBASIC17.15■□□□□ 0.34
TIMP4Q99727 AL138966.2-201ENST00000621997 464 ntBASIC17.15■□□□□ 0.34
TIMP4Q99727 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.15■□□□□ 0.34
TIMP4Q99727 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TIMP4Q99727 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 AC090164.3-201ENST00000610780 2143 ntBASIC17.15■□□□□ 0.34
TIMP4Q99727 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TIMP4Q99727 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TIMP4Q99727 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TIMP4Q99727 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TIMP4Q99727 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.15■□□□□ 0.34
TIMP4Q99727 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TIMP4Q99727 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TIMP4Q99727 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMP4Q99727 AC005332.8-201ENST00000622750 2735 ntBASIC17.14■□□□□ 0.33
TIMP4Q99727 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.14■□□□□ 0.33
TIMP4Q99727 TSPY23P-201ENST00000440136 739 ntBASIC17.14■□□□□ 0.33
TIMP4Q99727 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 KRT18P35-201ENST00000510488 1269 ntBASIC17.14■□□□□ 0.33
TIMP4Q99727 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.14■□□□□ 0.33
TIMP4Q99727 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.14■□□□□ 0.33
TIMP4Q99727 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMP4Q99727 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMP4Q99727 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMP4Q99727 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.14■□□□□ 0.33
TIMP4Q99727 AL512353.2-201ENST00000448759 1962 ntBASIC17.14■□□□□ 0.33
TIMP4Q99727 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMP4Q99727 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.14■□□□□ 0.33
TIMP4Q99727 Z98044.1-201ENST00000632503 1764 ntBASIC17.14■□□□□ 0.33
TIMP4Q99727 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TIMP4Q99727 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIMP4Q99727 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms